Browse of TCMCG057C36111 protein

CDS

Accession Number	TCMCG057C36111
gbkey	CDS
Protein Id	XP_018439962.1
Location	complement(join(43623093..43623173,43623258..43623378,43623646..43623765,43624000..43624100,43624207..43624338,43624450..43624536,43624618..43624719,43624865..43625008,43625579..43625716,43625794..43625964,43626466..43626630,43626704..43626781,43626861..43626987,43627110..43627300,43627373..43627445,43627530..43627585,43627701..43627871,43627965..43628078,43628149..43628241,43628637..43628843,43629414..43629491,43629612..43629698,43629800..43629881,43629963..43630075,43630256..43630406,43630634..43630752,43631302..43631499,43631609..43631732,43631879..43631998,43632085..43632215,43632566..43632703,43632808..43632909,43633246..43633452,43633541..43633657,43633867..43634010,43634371..43634460,43634855..43635082,43635158..43635280,43635397..43635482,43635915..43636074,43636629..43636739,43636828..43636932,43637016..43637090,43637187..43637282,43637378..43637518))
Gene	LOC108812256
GeneID	108812256
Organism	Raphanus sativus

Protein

Length	1865aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018584460.1
Definition	PREDICTED: nuclear pore complex protein NUP205 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex protein
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGTCGCCGAAAGAGTTGGCGGCCATAGTACAGTCTTCGCTGCTCGGAGCGTCGGGGACAAGCCCAACGCAGCGAATCGAACTCACTCACGCCCTTCGAAACTCCTTCTCCTCTTTCCAGAACCTCCTCTCTTTCCCGCCTCCGAAGGCGTCCGATAGAGCGCAAGTTCAGTCCAAAGAGATTCGACTTCCTGATTCGTTACCGATATCCTTGGATGAACAAGATGTTGCGATTAGCTTGAAACTGAGTGATGAGCTTCACCTAAATGAGATAGATTCTGTTCGTCTGCTTGTATCTGCAAACCAGGAGTGGGGCTTGATGGGACGGGACCCGCTTGAGATTCAACGGCTTGCAACTGGGCTATGGTACACAGGGAGAAGAGATCTTACATCAACGCTCTACACACTCCTCAGGGCAGTTGTTATGGACCAGGGGGTTGAACCTGATCTTATAGCTGACATTCAGGGCCTGTTGGAAGATCTGATTAAAGCCGGGCTCAGACAACGGTTGATTAATCTTATAAAGGAACTCAATCGGGAGGAACCTTCTGGCTTGGGTGGGCCCTTATGTGAGCAATACCTTATTGACTCGAGAGGTGCTCTTGTTGAACGAAGAGCTGTTGTTCATAGGGAAAGACTGATCCTGGGACATTGCCTTGTTCTTTCGATTTTGGTTGATAGACCTGGTCCAAAAGATGTGAAGGACATATACAATGTTTTAAAAGACAATGCAGTTCAATTAACTCAAGGAAATGACACCATAAAGTATCAGATTAGTTTCAGTCTTCTGTTTTCTCTCATCATTACCTTCATATCAGATGCCATCAGTGCACTATCGGATAAGTCATCTATGATATCTCAAGATGCTTCGTTTAGGACAGAATTTCAGAATATTGTCATGGCTTCTGGCAGTGACCTCCCTTCTGATGGCTTCATTGGTGGCGTAAGGCTTGCATGGGCTGTGCATTTAATGTTGATATATGATGGGATATCTGGAATGGATACAATTTCTGCTGCGTCAACAACTGATATGGGGCACATATGCTCCTGCCTGGAGTCCATCTTTTCAAAAAACGTGTTTCAGTTTTTGCTGGATAATGTTCTTCAAACTGCAGCCTACCAGAACGATGAGGAAGACATGATATACATATATAATGCGTATCTACACAAGTTAACCTCATGTTTTCTATCTCACCCGATTGCAAGAGACAAGGTGAAGGAATCAAAAGACATGGCTATGAGTGTTCTTAATTCTTACCGAATTAGTGATCCACTTGACGGCAGTATGCAGACTGAAGAGGCTGACAGGCCGCTACCATTTATTTCCCTTATGGAGTTTGTAAGCAATATCTATCAGAAAGAACCGGAGCTACTCTACGGGAATGATGTCTTGTGGACTTTTGTAAATTTTGCCGGAGAGGATCACACGAATTTCAAAACTCTTGTGGCATTTTTGGAAATGCTGCGCACCTTGGCTTCCACTCAAGAAGGTGCTTCTAAGGTCTATGAGTTGCTCAGAGGTACAGCATTTCGCAGTATAGGATGGGCCACTTTGTTTGATTGCATAGCAATTTACGATGACAAGTTCAAGCAGTCTCTTCAAACTGCTGGAGCGGTGATGCCAGACTTCCTGGAGGGCGATGCAAAAGCACTTGTTGCATATCTGAATGTACTTCAAAAGGTTGTTGAGAATGGTAATCCTACTGAGAGGAAAAATTGGTTTCCTGATATCGAACCATTTTTTAAGCTTCTTGGTTACGAAAACGTTCCTCCATATCTGAAGGGTGCTCTTAGGAAGACCATTGCTGCTTTTGTTCATGTATTTCCAGAAATGAGGGACCCTATCTGGGTTTTTCTTGAGCAGTATGATCTGCCGGTTGTTGTGGGATCACCGGTTGGAAAGACTGACCAATCTTCTCAGGTCTATGATATGCAGTTCGAGTTAAATGAAATTGAAGCAAGGAGAGAACAATATCCTTCAACAATATCGTTCCTTAATCTTATTAACGCTCTGATTGCCGGAGAGAAAGATGTGACTGATCGTGGTCGTAGATTTATTGGCATCTTCAAATTTGTTTATGATCATGTATTCGCCCCCTTTCCTCAAAGGGCATACTCGGATCCTTGTGAGAAGTGGCAATTGGTTGTGGCGTGCCTACAACATTTTCACATGATCTTAAGCATGTATGATATTCAGGAGGAGGATCTTGATGGATTTACGGAGCATTCACAGTTTCTGGTGTCAGCTGAAACATCTTTACTACAAACGCAGCTACCAGTTATAGAATTACTAAAAGATTTCATGAGTGGGAAAACACTGTATAGGAACCTTATGAGTGTCCTTCAGGTTGGGGTCAATTCCATCATGAGCGAGCGAATGAGTAAAACATACGGGAAGATCTTGGAAAAGGCTGTGCAACTCTCTTTGGAAATCTTATTACTTGTCTTTGAGAAGGATTTGCTTGTTTCTGATGTCTGGCGTCCGCTGTACCAGCCTTTGGATATAATTCTCTCGCAAGATCATAATCAAATTGTTGCCTTGCTGGAGTATGTCAGATATGATTCTCTTCCTCAGATTCAAAGATCATCAATCAAATTGATGAACATTTTAAGTTCTCGCTTGGTTGGTCTCGTTCCAATGCTGATTAAAATGAACGCTGCAAATTCCTTGATTGAGGATTATGCGTCCTGCCTTGAGCTACGACTTGAAGAGGGTGAAGTTGTAGAGAACAGTTGCGATGATCTAGGGGTCCTTATTATGCAGCTTCTGGTTGATTGTATCAACCGGCCTGCACCAAGTATCACACATTTGCTTCTTAAGTTTGACTTGGATGCCCCCGTGGAAGGCACAGTTTTGCAGCCTAAGTTCCACTACAGTTGTCTGAAGGTCATTCTTGAAATGCTGGAAAAACTTCCAAACCCTGATATAAACTTCTTACTCTTTGAGTGTGGCTTTCAGCTTTTGTGTGAGTTGAGTTTGGATCCACTAACTAGTGGTCCAATCATGGATCTCTTGAGCAGCAAAAAGTATCAGTTTTTTCTTCGGCATCTCGATACCATCGGTGTTGCTACCCTTCCAAAAAGAAGTGGTAGCCAGACGCTCCGTATTAGTTCACTTCATCAGAGGGCGTGGCTGTTAAAGCTCCTAGCTATTGCATTGCATAATGGTTCTGGAAGCAGTTCAGATCACCTAGAGGCGTGTCAGAGCATACTTTCTCATCTTTTTGGGCGGGAGGTAACTGAAGCAGGGAACGAACTTTATTTTTCCACTACATATCCTCTTCAGGATGGTCTTGATTATGCTGGAACTAGTTCAATCAGTAAAAGTAAGGTATTGGCGTTGCTTGAAATCCTCCAGTTTAGATCTCCTGATGCTTCGATGCAGCTTCCTCAAATTGTGTCAAGCCGAAAGTATGACACACTGGTAAAGGAAATACTTGAAAACCGTGATACCTCTGTAAGTGGCAGTATCTACTATTATTCTGAGCGTGGTGATCGTCTGATTGATCTATCTTCCTTCAGTAACAAACTCTATCAGGAACTACATTCTGGATTTCCCCTAGTGGACAGTTTTCAAAATGTTGCCGAGGTTAATGAAGTTAGAGAGACAATTCAACAGCTGTTGAAATGGGGGTGGAAGTATAATCGAAACCTTGAGGAGCAAGCCGCCCAACTGCATATGTTAGCTGGCTGGTCTCAGATTGTCGAGATATCTGCCTGCAGAAGAATATCTTCTCTGGATAATCGATCTGAAATTTTGTATCGGATACTTGACGCCTCTCTAAGTGCCTCTGCTTCTCCGGATTGTTCATTAAAAATGGCGTTTGTACTTACTCAGGTCGCCCTTACCTGCATTGCCAAACTTCGTGATGATAGATTTTTGTTTCATGGTGCCTTGAGTTCTGACACAGTGACATGTCTAGATGTCATGATGGTAAAACATTTATCCACTGGTGCTTGCCACTCACTTCTTTTGAAACTTGTTATGGCAATTCTAAGGCACGAGTCATCAGAATCCTTGAGAAGGCGCCAATATGCATTGCTCTTGAGCTATTTCCAGTATTGCCAGCATATGATTGCTCTGGAGGTGCCAACATCAGTCGTGCAATTCTTGTTGCTTAGTGATCAAGATGATGAAGATTTGGATATCCAGAAGATTGACAAGGAGCAGGCTGACCTTGCTCGTGCCAACTTTGCTATAATAAAGAAAGAAGCCCAGGGCATCTTGGATGTGGTAATCAAGGATGCATGTCAAGGCAGTGAATTTGGAAAAACGATTTCACTTTACGTGCTTGAAGCTCTTGTTTGTATTGATCACGAGAGATATTTTCTTAGTCAGCTTCAGAGCAGAGGTTTCATACGGTCTTGCCTTGGCAGCATTAGTAATATCTCCCACCAGGCCCAGGATGGAAGACATTTACTGGAGTCACAACAGCGAGCATGTACCTTAGAGGCAGAATTTGCATTGCTACTTAGAATTAGCCACAAGTACGGAAAGTCTGGAGGCCAGGTTCTGTTCTCCATGGGTGCACTGGAACATATCGCCTCGTTTAGAGCTACTATTACCAATGGAAATATGAGGCGGGTCAATATGAAGCTTCAGACTGATACAGGATATGATGTTCAAAAGCAACGAACAATAATTACTGCTGTCCTAAGATTGGTGTTTTCCCTAACTTCATTGGTTGAGACCTCTGAATTTTTCGAGGGGAGGAATAAAATTGTTCGTGAAGTTATTGAGTTTATCAAAGGACATCAATTGCTTTTTGACCAACTTCTTCGTGAAGACGTAACCCAAGCAGATGATTTATTGATGGAGCAAATTATCCTAGCAGTAGGAATATTGAGCAAGGTCTGGCCTTTCGAAGAGAACGATGAATATGGATTTGTTCAAGGGCTGTTTGATTTGATGAGCAAGCTTTTCATATCATCTCGAGAAGGACACGTAGTTCAGGGATCAGAGCTCAAATTGTCTCAGTTGCGGTTCAGCTTGACTTCTTTCTTATATTTTCTAGTGACAAAAAATTCTTTGAGGTTACAGATATCAAATGATTCTTGTGATAGCTCCGCTAAACTACGGCAACCAACGTTGATGCTGCTTGCATCTCTTCTTTCGCATGTGACTGATTCCCTCGAGGGGGCAGCAGAGAAAAAGTCCTTACTCCTTCATAAGATTAGAGACATTAACGAGCTCTCAAGACAAGATGTAGATGCAATAATCAAAATGTGTGATTGCCAAGAATATGTCACAGCATCAGACAACATACATAAAAGGAGATACATAGCTATGGTCGAAATGTGCAAAATCGTGGGCAGCAGGGACCAGTTAATCACATTGTTACTACAACTAACAGAGCATGTACTAAATATCATCTTGATCCATCTCCAAGATAGATCTGGTAGTTCAAATGAGCGGGCATCACCATATGGTTCAAAATCTCATCAACAACAGGAAGTTACAGATCTCTGTGGCAAATTGTCACCTATCACAGAAAGGCTTGCATTACTGAATGAGGGAAAAGTAGGACACAACTTGAAGGTTTTCAAGAGACTGGCGACTACTGTAAAAGAAATGGCTGTCCAAAAGTGTTTATGA

Protein:   MVSPKELAAIVQSSLLGASGTSPTQRIELTHALRNSFSSFQNLLSFPPPKASDRAQVQSKEIRLPDSLPISLDEQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLATGLWYTGRRDLTSTLYTLLRAVVMDQGVEPDLIADIQGLLEDLIKAGLRQRLINLIKELNREEPSGLGGPLCEQYLIDSRGALVERRAVVHRERLILGHCLVLSILVDRPGPKDVKDIYNVLKDNAVQLTQGNDTIKYQISFSLLFSLIITFISDAISALSDKSSMISQDASFRTEFQNIVMASGSDLPSDGFIGGVRLAWAVHLMLIYDGISGMDTISAASTTDMGHICSCLESIFSKNVFQFLLDNVLQTAAYQNDEEDMIYIYNAYLHKLTSCFLSHPIARDKVKESKDMAMSVLNSYRISDPLDGSMQTEEADRPLPFISLMEFVSNIYQKEPELLYGNDVLWTFVNFAGEDHTNFKTLVAFLEMLRTLASTQEGASKVYELLRGTAFRSIGWATLFDCIAIYDDKFKQSLQTAGAVMPDFLEGDAKALVAYLNVLQKVVENGNPTERKNWFPDIEPFFKLLGYENVPPYLKGALRKTIAAFVHVFPEMRDPIWVFLEQYDLPVVVGSPVGKTDQSSQVYDMQFELNEIEARREQYPSTISFLNLINALIAGEKDVTDRGRRFIGIFKFVYDHVFAPFPQRAYSDPCEKWQLVVACLQHFHMILSMYDIQEEDLDGFTEHSQFLVSAETSLLQTQLPVIELLKDFMSGKTLYRNLMSVLQVGVNSIMSERMSKTYGKILEKAVQLSLEILLLVFEKDLLVSDVWRPLYQPLDIILSQDHNQIVALLEYVRYDSLPQIQRSSIKLMNILSSRLVGLVPMLIKMNAANSLIEDYASCLELRLEEGEVVENSCDDLGVLIMQLLVDCINRPAPSITHLLLKFDLDAPVEGTVLQPKFHYSCLKVILEMLEKLPNPDINFLLFECGFQLLCELSLDPLTSGPIMDLLSSKKYQFFLRHLDTIGVATLPKRSGSQTLRISSLHQRAWLLKLLAIALHNGSGSSSDHLEACQSILSHLFGREVTEAGNELYFSTTYPLQDGLDYAGTSSISKSKVLALLEILQFRSPDASMQLPQIVSSRKYDTLVKEILENRDTSVSGSIYYYSERGDRLIDLSSFSNKLYQELHSGFPLVDSFQNVAEVNEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEISACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFLFHGALSSDTVTCLDVMMVKHLSTGACHSLLLKLVMAILRHESSESLRRRQYALLLSYFQYCQHMIALEVPTSVVQFLLLSDQDDEDLDIQKIDKEQADLARANFAIIKKEAQGILDVVIKDACQGSEFGKTISLYVLEALVCIDHERYFLSQLQSRGFIRSCLGSISNISHQAQDGRHLLESQQRACTLEAEFALLLRISHKYGKSGGQVLFSMGALEHIASFRATITNGNMRRVNMKLQTDTGYDVQKQRTIITAVLRLVFSLTSLVETSEFFEGRNKIVREVIEFIKGHQLLFDQLLREDVTQADDLLMEQIILAVGILSKVWPFEENDEYGFVQGLFDLMSKLFISSREGHVVQGSELKLSQLRFSLTSFLYFLVTKNSLRLQISNDSCDSSAKLRQPTLMLLASLLSHVTDSLEGAAEKKSLLLHKIRDINELSRQDVDAIIKMCDCQEYVTASDNIHKRRYIAMVEMCKIVGSRDQLITLLLQLTEHVLNIILIHLQDRSGSSNERASPYGSKSHQQQEVTDLCGKLSPITERLALLNEGKVGHNLKVFKRLATTVKEMAVQKCL